Ricci–Ollivier curvature of the rooted phylogenetic subtree–prune–regraft graph
نویسندگان
چکیده
منابع مشابه
Ricci-Ollivier Curvature of the Rooted Phylogenetic Subtree-Prune-Regraft Graph
Statistical phylogenetic inference methods use tree rearrangement operations to perform either hillclimbing local search or Markov chain Monte Carlo across tree topologies. The canonical class of such moves are the subtree-prune-regraft (SPR) moves that remove a subtree and reattach it somewhere else via the cut edge of the subtree. Phylogenetic trees and such moves naturally form the vertices ...
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ژورنال
عنوان ژورنال: Theoretical Computer Science
سال: 2017
ISSN: 0304-3975
DOI: 10.1016/j.tcs.2017.02.006